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Publications

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Towards a functional understanding of the plant metabolome
Scientific Year: 2020 DOI:10.1016/j.pbi.2020.02.005
Authors: Monika Kosmacz, Ewelina Maria Sokolowska, Saad Bouzaa, Aleksandra Skirycz
Current Opinion in Plant Biology
  • plant metabolome
  • functional diversity
The Isolation of Stress Granules from Plant Material
Scientific Year: 2020 DOI:https://doi.org/10.1002/cppb.20118
Authors: Monika Kosmacz, Aleksandra Skirycz
Current Protocols in Plant Biology
  • arabidopsis thaliana
  • affinity purification
  • plant metabolome
  • proteome
  • stress granules
  • stress granule extraction
  • stress response
Identification and characterization of the heat-induced plastidial stress granules reveal new insight into Arabidopsis stress response
Scientific Year: 2020 DOI:10.3389/fpls.2020.595792
Authors: Monika Chodasiewicz, Ewelina Maria Sokolowska, Anna C Nelson-Dittrich, Aleksandra Masiuk, Juan C Moreno, Andrew D. L. Nelson, Aleksandra Skirycz
Frontiers in Plant Science
  • chlorophyll biosynthesis
  • metabolites
  • plastid
  • stress granules
A multi-OMICs approach sheds light on the higher yield phenotype and enhanced abiotic stress tolerance in tobacco lines expressing the carrot lycopene β-cyclase1 gene
Scientific Year: 2021 DOI:10.3389/fpls.2021.624365
Authors: Juan C Moreno, Silvia Martinez-Jaime, Monika Chodasiewicz, Ewelina Maria Sokolowska, Philipp Schulz, Axel Fischer, Urszula Luzarowska, Michel Havaux, Aleksandra Skirycz
Frontiers in Plant Science
  • Nicotiana tabacum cv Xanthi
  • ROS
  • abiotic stress
  • carotenoids
  • lycopene β-cyclase
  • omics
  • transcription factors
  • β-carotene
Plant Stress Granules: Trends and Beyond
Scientific Year: 2021 DOI:10.3389/fpls.2021.722643
Authors: Israel Maruri-Lopez, Nicolas E Figueroa, Itzell E Hernandez-Sanchez, Monika Chodasiewicz
Frontiers in Plant Science
  • stress granules
  • trends
  • dynamic membrane-less condensates
  • liquid-liquid phase seperation
Global mapping of protein–metabolite interactions in Saccharomyces cerevisiae reveals that Ser-Leu dipeptide regulates phosphoglycerate kinase activity
Scientific Year: 2021 DOI:10.1038/s42003-021-01684-3
Authors: Marcin Luzarowski, Ruben Vicente, Andrei Kiselev, Mateusz Wagner, Dennis Schlossarek, Alexander Erban, Leonardo Perez de Souza, Dorothee Childs, Izabela Wojciechowska, Urszula Luzarowska, Michal Gorka, Ewelina Maria Sokolowska, Monika Chodasiewicz, Juan C Moreno, Aleksandra Brzezinska, Bhavana Vegesna, Joachim Kopka, Alisdair R Fernie, Lothar Willmitzer, Jennifer C Ewald, Aleksandra Skirycz
Communications Biology
  • protein-metabolite interactions
  • saccharomyces cerevisiae
  • Ser-Leu dipeptide
  • phosphoglycerate kinase activity
Tyr-Asp inhibition of glyceraldehyde 3-phosphate dehydrogenase affects plant redox metabolism
Scientific Year: 2021 DOI:10.15252/embj.2020106800
Authors: Juan C Moreno, Bruno E Rojas, Ruben Vicente, Michal Gorka, Timon Matz, Monika Chodasiewicz, Juan S Peralta-Ariza, Youjun Zhang, Saleh Alseekh, Dorothee Childs, Marcin Luzarowski, Zoran Nikoloski, Raz Zarivach, Dirk Walther, Matias D Hartman, Carlos M Figueroa, Alberto A Iglesias, Alisdair R Fernie, Aleksandra Skirycz
  • arabidopsis
  • GAPDH
  • NADPH
  • central carbon metabolism
  • dipeptides
A manipulation of carotenoid metabolism influence biomass partitioning and fitness in tomato
Scientific Year: 2022 DOI:https://doi.org/10.1016/j.ymben.2022.01.004
Authors: Jianing Mi, Jose G Vallarino, Ivan Petrik, Ondrej Novak, Sandra M Correa, Monika Chodasiewicz, Michel Havaux, Manuel Rodriguez-Concepcion, Salim Al-Babili, Alisdair R Fernie, Aleksandra Skirycz, Juan C Moreno
Metabolic Engineering
  • abiotic stress
  • apocarotenoids
  • biomass and yield
  • carotenoids
  • metabolic engineering
  • metabolites and lipids
  • phytohormones
A New Approach to the Study of Plastidial Stress Granules: The Integrated Use of Arabidopsis thaliana and Chlamydomonas reinhardtii as Model Organisms
Scientific Year: 2022 DOI:10.3390/plants11111467
Authors: Fareena Rafique, Kyle J Lauersen, Monika Chodasiewicz, Nicolas E Figueroa
Plants
  • arabidopsis
  • chlamydomonas
  • abiotic stress
  • chloroplast
  • liquid-liquid phase seperation
  • stress granules
  • stress response
Affinity Purification Protocol Starting with a Small Molecule as Bait
Scientific Year: 2022 DOI:10.1007/978-1-0716-2624-5_2
Authors: Nicolas E Figueroa, Itzell E Hernandez-Sanchez, Israel Maruri-Lopez, Monika Chodasiewicz
Cell-Wide Identification of Metabolite-Protein Interactions 11-19, Methods in Molecular Biology Book
  • affinity purification
  • mass spectrometry
  • metabolites
  • ligand
  • protein-metabolite interactions
  • protein-protein interactions
Landscape of biomolecular condensates in heat stress responses
Scientific Year: 2022 DOI:10.3389/fpls.2022.1032045
Authors: Violeta Londono Velez, Fatema Alquraish, Ibrahim Tarbiyyah, Fareena Rafique, Duruo Mao, Monika Chodasiewicz
Frontiers in Plant Science
  • LLPS
  • biomolecular condensates
  • heat stress response
  • signaling
  • stress granules
Composition and function of stress granules and P-bodies in plants
Scientific Year: 2024 DOI:10.1016/j.semcdb.2022.11.008
Authors: Alyssa Kearly, Andrew D. L. Nelson, Aleksandra Skirycz, Monika Chodasiewicz
Seminars in Cell & Developmental Biology
  • biomolecular condensates
  • metabolites
  • P-bodies
  • proteins
  • stress granules
  • mRNA
2′,3′-cAMP treatment mimics the stress molecular response in Arabidopsis thaliana
Scientific Year: 2022 DOI:10.1093/plphys/kiac013
Authors: Monika Chodasiewicz, Olga Kerber, Michal Gorka, Juan C Moreno, Israel Maruri-Lopez, Romina I Minen, Arun Sampathkumar, Andrew D. L. Nelson, Aleksandra Skirycz
Plant Physiology
  • 2',3'-cAMP
  • arabidopsis thaliana
  • stress response
  • RNA degradation
  • 1
  • 2
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