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Navigating biomolecular condensates in plants from patterns to functions
Scientific Year: 2024 DOI:10.1016/j.molp.2024.08.001
Authors: Yansong Miao, Monika Chodasiewicz, Xiaofeng Fang

Molecular plant, 

also available on Science direct 

https://www.sciencedirect.com/science/article/pii/S1674205224002569

https://doi.org/10.1016/j.molp.2024.08.001

Engineering a One Health Super Wheat
Scientific Year: 2024 DOI:https://doi.org/10.1146/annurev-phyto-121423-042128
Authors: Francisco M. Ayala, Itzell E Hernandez-Sanchez, Monika Chodasiewicz, Brande B.H. Wulff, Radim Svačina

Annual Review of Phytopathology

  • wheat
  • Triticum aestivum
  • disease resistance
  • stress tolerance
  • genetic modification
  • GM crops
Silencing translation with phenolic acids
Scientific Year: 2023 DOI:https://doi.org/10.1038/s41477-023-01497-8
Authors: Venkatesh P. Thirumalaikumar, Monika Chodasiewicz, Aleksandra Skirycz

Nature Plants

  • plant signalling
  • Plant stress responses
Involvement of small molecules and metabolites in regulation of biomolecular condensate properties
Scientific Year: 2023 DOI:10.1016/j.pbi.2023.102385
Authors: Israel Maruri-Lopez, Monika Chodasiewicz

Current Opinion in Plant Biology

  • biomolecular condensates
  • proteins
  • nucleic acids
  • small molecule complexes
  • liquid-liquid phase separation
Protein interactome of 3′,5′-cAMP reveals its role in regulating the actin cytoskeleton
Scientific Year: 2023 DOI:10.1111/tpj.16313
Authors: Nicolas E Figueroa, Peter Franz, Marcin Luzarowski, Federico Martinez-Seidel, Juan C Moreno, Dorothee Childs, Aleksandra Ziemblicka, Arun Sampathkumar, Tonni Grube Andersen, Georgios Tsiavaliaris, Monika Chodasiewicz, Aleksandra Skirycz
The Plant Journal
  • protein interactors
  • 3',5'-cAMP
  • metabolites
  • chemo-proteomics
Stress-related biomolecular condensates in plants
Scientific Year: 2023 DOI:10.1093/plcell/koad127
Authors: Jorge Solis-Miranda, Monika Chodasiewicz, Aleksandra Skirycz, Alisdair R Fernie, Panagiotis N Moschou, Peter V Bozhkov, Emilio Gutierrez-Beltran
The Plant Cell
  • biomolecular condensates
  • membraneless organelle
  • liquid-liquid phase separation
Editorial: Biology of Stress Granules in Plants
Scientific Year: 2022 DOI:10.3389/fpls.2022.938654
Authors: Monika Chodasiewicz, J C Jang, Emilio Gutierrez-Beltran

Frontiers in Plant Science

  • stress granules
  • biology
  • eukaryotic organisms
Missexpression of a Chloroplast Aspartyl Protease Leads to Severe Growth Defects and Alters Carbohydrate Metabolism in Arabidopsis
Scientific Year: 2012 ISSN:1237–1250 DOI:10.1104/pp.112.204016
Authors: Eleonora Paparelli, Silvia Gonzali, Sandro Parlanti, Giacomo Novi, Federico M. Giorgi, Francesco Licausi, Regina Feil, John E. Lunn, Henrike Brust, Joost T. van Dongen, Martin Steup, Pierdomenico Perata, Monika Kosmacz

Plant Physiology 160: 1237-1250 

  • chloroplast
  • aspartyl
  • protease
  • growth defects
  • carbohydrate metabolism
  • arabidopsis
Oxygen perception in plants
Scientific Year: 2014 DOI:10.1007/978-3-7091-1254-0_1
Authors: Monika Kosmacz, Daan A. Weits

Low oxygen stress in plants. Springer, Heidelberg. 

  • oxygen
  • oxygen sensing
Oxygen sensing in plants is mediated by an N-end rule pathway for protein destabilization
Scientific Year: 2011 DOI:10.1038/nature10536
Authors: Francesco Licausi, Monika Kosmacz, Daan A. Weits, Beatrice Giuntoli, Federico M. Giorgi, Laurentius A. C. J. Voesenek, Pierdomenico Perata, Joost T. van Dongen

Nature 479, 419-422 

  • oxygen sensing
  • N-end rule pathway
  • protein destabilization
  • eukaryotic organisms
  • respiratory energy production
Plant cysteine oxidases control the oxygen-dependent branch of the N-end rule pathway
Scientific Year: 2014 DOI:10.1038/ncomms4425
Authors: Daan A. Weits, Beatrice Giuntoli, Monika Kosmacz, Sandro Parlanti, Hans-Michael Hubberten, Heike Riegler, Rainer Hoefgen, Pierdomenico Perata, Joost T. van Dongen, Francesco Licausi

Nature communications 

  • cysteine oxidases
  • N-end rule pathway
  • selective proteolysis
A trihelix DNA binding protein counterbalances hypoxia-responsive transcriptional activation in Arabidopsis
Scientific Year: 2014 DOI:10.1371/journal.pbio.1001950
Authors: Beatrice Giuntoli, Seung Cho Lee, Francesco Licausi, Monika Kosmacz, Teruko Oosumi, Joost T. van Dongen, Julia Bailey-Serres, Pierdomenico Perata

Plos Biology 

  • trihelix DNA
  • binding protein
  • hypoxia
  • arabidopsis
  • transcriptional activation
  • ethylene-responsive
  • normoxia
The stability and nuclear localization of the transcription factor RAP2.12 are dynamically regulated by oxygen concentration
Scientific Year: 2014 DOI:10.1111/pce.12493
Authors: Monika Kosmacz, Sandro Parlanti, Markus Schwarzlander, Friedrich Kragler, Francesco Licausi, Joost T. van Dongen

Plant Cell and Environment 

  • arabidopsis
  • ethylene response factor
  • N-end rule pathway
  • anoxia
  • confocal laser scanning microscopy
  • hypoxia
  • oxygen sensing
Constitutively expressed ERF-VII transcription factors redundantly activate the core anaerobic response in Arabidopsis thaliana
Scientific Year: 2015 DOI:10.1016/j.plantsci.2015.03.008
Authors: Liem T. Bui, Beatrice Giuntoli, Monika Kosmacz, Sandro Parlanti, Francesco Licausi
Plant Science
  • arabidopsis thaliana
  • ethylene response factor
  • hypoxia
  • transcriptional activation
System-wide detection of protein-small molecule complexes suggests extensive metabolite regulation in plants
Scientific Year: 2017 DOI:10.1038/srep42387
Authors: Daniel Veyel, Sylwia Kierszniowska, Monika Kosmacz, Ewelina Maria Sokolowska, Aenne Michaelis, Marcin Luzarowski, Jagoda Szlachetko, Lothar Willmitzer, Aleksandra Skirycz

Scientific Reports 

  • small molecule complexes
  • metabolite regulation
  • protein detection
Affinity purification with metabolomic and proteomic analysis unravels diverse roles of nucleoside diphosphate kinases
Scientific Year: 2017 DOI:10.1093/jxb/erx183
Authors: Marcin Luzarowski, Monika Kosmacz, Ewelina Maria Sokolowska, Weronika Jasinska, Lothar Willmitzer, Daniel Veyel, Aleksandra Skirycz

Journal of experimental botany 

  • affinity purification
  • arabidopsis thaliana
  • NDPK
  • glutathionylation
  • metabolites
  • plant
  • protein-metabolite interactions
  • protein-protein interactions
Interaction of 2’,3’-cAMP with Rbp47b plays a role in stress granule formation
Scientific Year: 2018 DOI:10.1104/pp.18.00285
Authors: Kosmacz M., Luzarowski M., Kerber O., Leniak E., Gutiérrez-Beltrán E., MorenoJ.C., Gorka M., Szlachetko J., Veyel D., Graf A., Skirycz A.
Plant Physiology 
  • 2',3'-cAMP
  • RNA degradation
  • stress granule formation
  • Rbp47b
PROMIS, global analysis of PROtein-Metabolite Interactions using Size separation in Arabidopsis thaliana
Scientific Year: 2018 DOI:10.1074/jbc.RA118.003351
Authors: Daniel Veyel, Ewelina Maria Sokolowska, Juan C Moreno, Sylwia Kierszniowska, Justyna Cichon, Izabela Wojciechowska, Marcin Luzarowski, Monika Kosmacz, Jagoda Szlachetko, Michal Gorka, Michael Meret, Alexander Graf, Etienne H Meyer, Lothar Willmitzer, Aleksandra Skirycz

Journal of Biological Chemistry 

  • chromatography
  • ligand-binding protein
  • metabolomics
  • protein-protein interactions
  • protein-small molecule interactions
  • proteomics
  • size-exclusion chromatography
  • systems biology
Low-oxygen response is triggered by an ATP-dependent shift in oleoyl-CoA in Arabidopsis thaliana
Scientific Year: 2018 DOI:10.1073/pnas.1809429115
Authors: Romy R. Schmidt, Martin Fulda, Melanie V. Paul, Max Anders, Frederic Plum, Daniel A. Weits, Monika Kosmacz, Tony R. Larson, Ian A. Graham, Gerrit T. S. Beemster, Francesco Licausi, Peter Geigenberger, Jos H. Schippers, Joost T. van Dongen
PNAS
  • low-oxygen response
  • ATP-dependent shift
  • oleoyl-CoA
  • arabidopsis
Protein and metabolite composition of Arabidopsis stress granules
Scientific Year: 2019 DOI:10.1111/nph.15690
Authors: Monika Kosmacz, Michal Gorka, Stephan Schmidt, Marcin Luzarowski, Juan C Moreno, Jagoda Szlachetko, Ewa Leniak, Ewelina Maria Sokolowska, Kostika Sofroni, Arp Schnittger, Aleksandra Skirycz
New Phytologist
  • arabidopsis thaliana
  • CDKA1
  • affinity purification
  • stress granule extraction
  • stress granule metabolome
  • stress granule proteome
  • stress response
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